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Standardization of Hepatitis E Virus (HEV) Nucleic Acid Amplification Technique-Based Assays: an Initial Study To Evaluate a Panel of HEV Strains and Investigate Laboratory Performance▿†

机译:基于戊型肝炎病毒(HEV)核酸扩增技术的标准化方法:评估一组戊型肝炎病毒株和调查实验室性能的初步研究▿†

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摘要

The performance of hepatitis E virus (HEV) RNA nucleic acid amplification (NAT)-based assays has been investigated using a panel of HEV-containing plasma samples. The panel comprised 22 HEV-positive plasma samples representing 10-fold serial dilutions of HEV genotypes 3a, 3b, 3f, and 4c obtained from blood donors. Two negative-control plasma samples were included. All samples were blinded. The plasma samples were prepared as liquid/frozen materials and distributed to participants on dry ice. Laboratories were requested to test the panel using their routine HEV assays and to score samples as either positive or negative and could optionally return data in copies/ml for HEV RNA. Twenty laboratories from 10 different countries participated in the study. Data were returned by all participating laboratories; 10 laboratories returned quantitative data. All assays except one were developed in-house using conventional or real-time reverse transcriptase PCR (RT-PCR) methodologies. There was a 100- to 1,000-fold difference in sensitivity between the majority of assays, independent of the virus strain. Although the quantitative data were limited, for the samples in the range of ∼6 to 4 log10 copies/ml, the standard deviations of the geometric means of the samples ranged between 0.38 and 1.09. Except for one equivocal result, HEV RNA was not detected in the negative samples. The variability of assay sensitivity highlights the need for the standardization of HEV RNA NAT assays.
机译:已使用一组含HEV的血浆样品研究了基于戊型肝炎病毒(HEV)RNA核酸扩增(NAT)的检测的性能。该小组包括22个HEV阳性血浆样品,代表从献血者那里获得的HEV基因型3a,3b,3f和4c的10倍系列稀释液。包括两个阴性对照血浆样品。所有样品都是盲的。将血浆样品制备为液体/冷冻材料,并在干冰上分配给参与者。要求实验室使用常规的HEV检测方法对检测小组进行测试,并对样品进行阳性或阴性评分,并可以选择以HEV RNA拷贝/ ml的形式返回数据。来自10个不同国家的20个实验室参加了这项研究。所有参与实验室返回了数据; 10个实验室返回了定量数据。除一种测定法外,所有测定法均使用常规或实时逆转录酶PCR(RT-PCR)方法在内部进行开发。大多数检测方法之间的灵敏度相差100到1,000倍,与病毒株无关。尽管定量数据是有限的,但对于约6至4 log10拷贝/ ml的样品,样品几何平均值的标准偏差在0.38至1.09之间。除了一个模棱两可的结果,在阴性样品中未检测到HEV RNA。分析灵敏度的可变性凸显了对HEV RNA NAT分析标准化的需求。

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